- Variants detected in homozygous state in fifteen patients with Wilson disease.
Patients’ IDs | No. of alleles | Nucleotide change | Codon change | Variant effect | Variant classification | Presentation | MLS score after NGS |
---|---|---|---|---|---|---|---|
14, 23 | 4 | c.956delC | p.Pro319HisfsTer44 | Frameshift | Pathogenic | Mixed, Hepatic | 10, 11 |
26, 50 | 4 | c.3305T>C | p.Ile1102Thr | Missense | Pathogenic | Hepatic | 8, 9 |
13 | 3 | c.3741-3742dupCA* | p.Lys1248ThrfsTer83 | Frameshift | Pathogenic | Hepatic | 10 |
51 | 3 | c.3694A>C& | p.Thr1232Pro | Missense | Likely pathogenic | Hepatic | 8 |
1 | 2 | c.4309A>T | p.Lys1437Ter | Stop-gain | pathogenic | Mixed | 7 |
4# | 2 | c.2575+1G>C | - | Splice-donor | pathogenic | Hepatic | 9 |
30# | 2 | c.4021G>A | p.Gly1341Ser | Missense | Likely pathogenic | Hepatic | 10 |
33 | 2 | c.2336G>A | p.Trp779Ter | Stop-gain | pathogenic | Mixed | 8 |
43# | 2 | c.2866-2A>C | - | Splice acceptor | pathogenic | Hepatic | 7 |
45 | 2 | c.2905C>T | p.Arg969Trp | Missense | Likely pathogenic | Hepatic | 8 |
48 | 2 | c.3061-12T>A | - | Intronic variant | pathogenic | Hepatic | 6 |
53 | 2 | c.2987T>C | p.Met996Thr | Missense | pathogenic | Hepatic | 7 |
54 | 2 | c.2304dupC | p.Met769HisfsTer26 | Frameshift | pathogenic | Mixed | 10 |
Total: 15 | 32 | No. of variants = 13 |
MLS: modified Leipzig score
↵# Those patients have one additional variant in heterozygous state, namely: (c.2663C>T, p.Thr888Ile), (c.2924C>A, p.Ser975Tyr), and (c.1934T>G, p.Met645Arg).
↵* This variant is also detected in patient no. 5 but in heterozygous state, so total no. of alleles carrying this variant were 3.
↵& : This variant is also detected in patient no. 38 but in heterozygous state, so total no of alleles carrying this variant were 3.