OncotRF: an online resource for exploration of tRNA-derived fragments in human cancers

D Yao, X Sun, L Zhou, M Amanullah, X Pan, Y Liu… - RNA biology, 2020 - Taylor & Francis
Transfer RNA-derived fragments (tRFs) are a new class of small non-coding RNAs whose
biological roles in cancers are not well understood. Emerging evidence suggests that tRFs are …

[HTML][HTML] An integrated epigenomic-transcriptomic landscape of lung cancer reveals novel methylation driver genes of diagnostic and therapeutic relevance

X Sun, J Yi, J Yang, Y Han, X Qian, Y Liu, J Li, B Lu… - Theranostics, 2021 - ncbi.nlm.nih.gov
Background: Aberrant DNA methylation occurs commonly during carcinogenesis and is of
clinical value in human cancers. However, knowledge of the impact of DNA methylation …

A comprehensive evaluation of alignment software for reduced representation bisulfite sequencing data

X Sun, Y Han, L Zhou, E Chen, B Lu, Y Liu, X Pan… - …, 2018 - academic.oup.com
… The authors wish it to be known that, in their opinion, Xiwei Sun and Yi Han authors should
… The authors wish it to be known that, in their opinion, Xiwei Sun and Yi Han authors should …

[HTML][HTML] Mixed model-based deconvolution of cell-state abundances (MeDuSA) along a one-dimensional trajectory

L Song, X Sun, T Qi, J Yang - Nature Computational Science, 2023 - nature.com
Deconvoluting cell-state abundances from bulk RNA-sequencing data can add considerable
value to existing data, but achieving fine-resolution and high-accuracy deconvolution …

SDUMLA-HMT: A multimodal biometric database

Y Yin, L Liu, X Sun - … Recognition: 6th Chinese Conference, CCBR 2011 …, 2011 - Springer
In this paper, the acquisition and content of a new homologous multimodal biometric database
are presented. The SDUMLA-HMT database consists of face images from 7 view angles, …

[HTML][HTML] The impact of exosomes derived from distinct sources on rheumatoid arthritis

S Zhang, Z Duan, F Liu, Q Wu, X Sun, H Ma - Frontiers in Immunology, 2023 - frontiersin.org
Rheumatoid arthritis (RA) is an autoimmune disease that can induce joint deformities and
functional impairment, significantly impacting the overall well-being of individuals. Exosomes, …

[HTML][HTML] Circ2Disease: a manually curated database of experimentally validated circRNAs in human disease

D Yao, L Zhang, M Zheng, X Sun, Y Lu, P Liu - Scientific reports, 2018 - nature.com
Circular RNAs (circRNAs), a new class of regulatory noncoding RNAs, play important roles
in human diseases. While a growing number of circRNAs have been characterized with …

[HTML][HTML] Multivariate dimensionality reduction approaches to identify gene-gene and gene-environment interactions underlying multiple complex traits

HM Xu, XW Sun, T Qi, WY Lin, N Liu, XY Lou - PLoS One, 2014 - journals.plos.org
The elusive but ubiquitous multifactor interactions represent a stumbling block that urgently
needs to be removed in searching for determinants involved in human complex diseases. …

Flavor deterioration of liquid endosperm in postharvest tender coconut revealed by LC-MS-based metabolomics, GC-IMS and E-tongue

X Shen, Y Wang, L Ran, R Liu, X Sun, L Hu… - Postharvest Biology and …, 2022 - Elsevier
LC-MS-based non-targeted metabolomics, GC-IMS and E-tongue were employed to study
the dynamical changes of the liquid endosperm, normally known as coconut water (CW), in …

[HTML][HTML] Association mapping for epistasis and environmental interaction of yield traits in 323 cotton cultivars under 9 different environments

Y Jia, X Sun, J Sun, Z Pan, X Wang, S He, S Xiao… - PloS one, 2014 - journals.plos.org
Improving yield is a major objective for cotton breeding schemes, and lint yield and its three
component traits (boll number, boll weight and lint percentage) are complex traits controlled …