Skip to main content

Main menu

  • Home
  • Content
    • Latest
    • Archive
    • home
  • Info for
    • Authors
    • Reviewers
    • Subscribers
    • Institutions
    • Advertisers
    • Join SMJ
  • About Us
    • About Us
    • Editorial Office
    • Editorial Board
  • More
    • Advertising
    • Alerts
    • Feedback
    • Folders
    • Help
  • Other Publications
    • NeuroSciences Journal

User menu

  • My alerts
  • Log in

Search

  • Advanced search
Saudi Medical Journal
  • Other Publications
    • NeuroSciences Journal
  • My alerts
  • Log in
Saudi Medical Journal

Advanced Search

  • Home
  • Content
    • Latest
    • Archive
    • home
  • Info for
    • Authors
    • Reviewers
    • Subscribers
    • Institutions
    • Advertisers
    • Join SMJ
  • About Us
    • About Us
    • Editorial Office
    • Editorial Board
  • More
    • Advertising
    • Alerts
    • Feedback
    • Folders
    • Help
  • Follow psmmc on Twitter
  • Visit psmmc on Facebook
  • RSS
Research ArticleArticle
Open Access

Identification of FBXW7α-regulated genes in M1-polarized macrophages in colorectal cancer by RNA sequencing

Yupeng Long and Yujun Zhu
Saudi Medical Journal August 2019, 40 (8) 766-773; DOI: https://doi.org/10.15537/smj.2019.8.24361
Yupeng Long
From the Department of Clinical Laboratory (Long), and from the Department of General Surgery (Zhu), Army 958 Hospital of the Chinese People’s Liberation Army, Chongqing, China
MD, PhD
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: [email protected]
Yujun Zhu
From the Department of Clinical Laboratory (Long), and from the Department of General Surgery (Zhu), Army 958 Hospital of the Chinese People’s Liberation Army, Chongqing, China
MD, PhD
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • Article
  • Figures & Data
  • eLetters
  • Info & Metrics
  • References
  • PDF
Loading

Article Figures & Data

Figures

  • Tables
  • Figure 1
    • Download figure
    • Open in new tab
    • Download powerpoint
    Figure 1

    Knockdown of FBXW7α alters the phenotype of macrophage in response to colon cancer. A) Efficiency of interference plasmid transfection was examined in RAW264.7 macrophages. B-C) FBXW7α siRNA plasmid or the control vector, were introduced into RAW264.7 for 36h, and then the cells were co-cultured with colon-26 cells for 24h, B) In parallel, total RNA was isolated from co-cultured macrophage for quantitative reverse transcription-polymerase chain reaction (qRT-PCR) analysis of cyclooxigenase (COX)-2 and nitric oxide synthase 2 (NOS2); C) The cell-free supernatant was collected and analyzed by ELISA against IL6, IL12p40, and tumor necrosis factor-α (TNFα). GAPDH - glyceraldehyde 3-phosphate dehydrogenase, iNOS - inducible nitric oxide synthase, CTL - control group

  • Figure 2
    • Download figure
    • Open in new tab
    • Download powerpoint
    Figure 2

    Genome-wide sequencing together with quantitative reverse transcription-polymerase chain reaction (qRT-PCR) analysis identifies FBXW7α-regulated genes of macrophage in response to colon cancer. A) the RNA samples prepared in Figure 1B were used to perform the RNA-seq experiment. Heatmap analysis displaying the dis-regulated targets in FBXW7α siRNA transfected macrophage, comparing with the control group. B) Volcano plot displaying the number of genes with significant differences. C) qRT-PCR analysis of validate five up-regulated targets identified by RNA-seq. D) qRT-PCR analysis of validate three down-regulated targets identified by RNA-seq. CTL - control group, siRNA: FBXW7α - interference plasmid transfection group.

  • Figure 3
    • Download figure
    • Open in new tab
    • Download powerpoint
    Figure 3

    MiR-205 is required in the regulation of tumor-associated macrophages (TAM) polarization by FBXW7α. A-C) FBXW7α siRNA plasmid or control vector, together with miR-205 inhibitor or inhibitor negative control (inhibitor NC), were introduced into RAW264.7 for 36-hours, and then the cells were co-cultured with Colon-26 cells for 24-hours. The cell-free supernatant was collected and analyzed by ELISA against A) IL6, B) IL12p40, and C)TNFα. siRNA: FBXW7α interference plasmid transfection group. NC - negative control group.

  • Figure 4
    • Download figure
    • Open in new tab
    • Download powerpoint
    Figure 4

    FBXW7α/miR-205 axis regulate tumor-associated macrophages (TAM) polarization through affecting SMAD1 expression. A-B) SMAD1 is a target of miR-205. A) The region of the human SMAD1 3’UTR predicted to be targeted by miR-205. B) HEK-293T cells were transiently co-transfected with luciferase reporter vectors, and either miR-205 mimics or negative control. Luciferase activities were normalized to the activity of Renilla luciferase. (C-D) FBXW7α siRNA plasmid or control vector, together with miR-205 inhibitor or inhibitor negative control (inhibitor NC), were introduced into RAW264.7 for 36-hours, and then the cells were cocultured with Colon-26 cells for 24-hours. C) The mRNA level was determined by quantitative reverse transcription-polymerase chain reaction (qRT-PCR) assay; and D) protein level was determined by western-blotting assay. (E-G FBXW7α siRNA plasmid or control vector, together with SMAD1 overexpressing plasmid or NC, were introduced into RAW264.7 for 36-hours, and then the cells were cocultured with Colon-26 cells for 24-hours. The cell-free supernatant was collected and analyzed by ELISA against E) IL6, (F) IL12p40 and G) tumor necrosis factor-α (TNFα).

Tables

  • Figures
  • Table 1
PreviousNext
Back to top

In this issue

Saudi Medical Journal: 40 (8)
Saudi Medical Journal
Vol. 40, Issue 8
1 Aug 2019
  • Table of Contents
  • Cover (PDF)
  • Index by author
Print
Download PDF
Email Article

Thank you for your interest in spreading the word on Saudi Medical Journal.

NOTE: We only request your email address so that the person you are recommending the page to knows that you wanted them to see it, and that it is not junk mail. We do not capture any email address.

Enter multiple addresses on separate lines or separate them with commas.
Identification of FBXW7α-regulated genes in M1-polarized macrophages in colorectal cancer by RNA sequencing
(Your Name) has sent you a message from Saudi Medical Journal
(Your Name) thought you would like to see the Saudi Medical Journal web site.
Citation Tools
Identification of FBXW7α-regulated genes in M1-polarized macrophages in colorectal cancer by RNA sequencing
Yupeng Long, Yujun Zhu
Saudi Medical Journal Aug 2019, 40 (8) 766-773; DOI: 10.15537/smj.2019.8.24361

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
Share
Identification of FBXW7α-regulated genes in M1-polarized macrophages in colorectal cancer by RNA sequencing
Yupeng Long, Yujun Zhu
Saudi Medical Journal Aug 2019, 40 (8) 766-773; DOI: 10.15537/smj.2019.8.24361
Twitter logo Facebook logo Mendeley logo
  • Tweet Widget
  • Facebook Like
  • Google Plus One
Bookmark this article

Jump to section

  • Article
    • Abstract
    • Methods
    • Results
    • Discussion
    • Acknowledgment
    • Footnotes
    • References
  • Figures & Data
  • eLetters
  • References
  • Info & Metrics
  • PDF

Related Articles

  • No related articles found.
  • PubMed
  • Google Scholar

Cited By...

  • No citing articles found.
  • Google Scholar

More in this TOC Section

  • Objective and subjective results of the Bonebridge transcutaneous active direct-drive bone conduction hearing implant
  • Unplanned hospital readmissions following congenital heart diseases surgery
  • The accuracy of endometrial sampling for the diagnosis of patterns of endometrial pathology in women presenting with abnormal uterine bleeding
Show more Article

Similar Articles

CONTENT

  • home

JOURNAL

  • home

AUTHORS

  • home
Saudi Medical Journal

© 2025 Saudi Medical Journal Saudi Medical Journal is copyright under the Berne Convention and the International Copyright Convention.  Saudi Medical Journal is an Open Access journal and articles published are distributed under the terms of the Creative Commons Attribution-NonCommercial License (CC BY-NC). Readers may copy, distribute, and display the work for non-commercial purposes with the proper citation of the original work. Electronic ISSN 1658-3175. Print ISSN 0379-5284.

Powered by HighWire